Blog Detail

Autarchy of the Private Cave

http://www.bogdan.org.ua/

This is a personal blog used to make notes on what I am doing. What I do, usually concerns or is related to science (bioinformatics), society (general issues), some bits of programming (PHP), etc.

• Added on: Dec 12th, 2006
• Country: Ukraine
• Language: English

• Author: Bogdan
• Listed in: Personal Technology Science
• Tags: programming web links Linux misc bioinformatics

View More Recent Posts

• R script to filter probesets with log-expression values below the lowest spike-in

  Posted on Wednesday January 27th, 2010 at 06:44 am in programming, science, bioinformatics, r, filter, microarray, affymetrix, log-expression, probeset, spike-in

  Sometimes there is a need to remove all the probesets, which have expression values below the minimal spike-in intensity on the Affymetrix microarray. The reasoning behind this procedure is simple: minimal-expression spike-ins represent the bottom ma...

• Chandler 1.0.3 package for Debian testing amd64

  Posted on Monday January 25th, 2010 at 02:52 am in Software, Linux, chandler, debian, package, *nix, amd64

  Recently, I have come across the Chandler project. Chandler is a sophisticated organizer, including tasks, calendar, appointments, invitations, and many more. The project does provide a 64-bit package for Ubuntu 8.10 "Intrepid Ibex", but it has a dep...

• Standard deviation and variance in pictures

  Posted on Sunday January 24th, 2010 at 08:07 am in math, links, statistics, variance, standard deviation, youngling

  MathIsFun offers nicely illustrated pages on math, algebra, geometry and maybe more. For example, there is a step-by-step instruction on calculating variance and standard deviation for a set of measured dog heights, with a final picture (below) illu...

• Simple and efficient Drupal upgrades: patch!

  Posted on Sunday January 3rd, 2010 at 07:50 am in web, links, drupal, patch, notepad, upgrade

  Just a quick note: upgrading Drupal using a patch file is a really efficient and fast method, especially because diff/patch files are available for different Drupal version combinations. ...

• Does Google attack your servers, too?

  Posted on Saturday December 5th, 2009 at 06:28 am in google, web, abuse, misc, server, attack

  For about 2 weeks now, I am every day alerted of the suspicious behavior of some computer/server from the Google’s IP range: Dec 5 05:39:33 mx suhosin[3701]: ALERT – tried to register forbidden variable ‘_REQUEST[option]‘ ...

• fail2ban and Google translate: how to easily cut your WP blog traffic

  Posted on Friday November 13th, 2009 at 06:11 pm in Software, php, blog, web, wordpress, traffic, URL, wordpress plugins, whitelist, wp, rule, google translate

  fail2ban has a php-url-fopen rule. WordPress has a Global Translator plugin, which – among others – uses Google Translate service. If someone uses Google Translate (e.g. using Global Translate’s mini-language-flags), and goes back t...

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